DNA Damage Atlas

SRX4905882-GM13069_DSBC_BanII

Basic Information Genome Browser Telomere Analysis Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR8078681


Source Project ID:   

PRJNA497476

Cell Type:   

GM13069


Organism:   

Homo sapiens


Targeted break:   

BanII


Layout:   

PAIRED


Instrument model:   

illumina NextSeq 500


Technique:   

DSBCapture


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.6301


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM69236928/6462.39/
chrM34823487/6103.37/
chrM1200812013/5722.59/
chrM1355713562/5679.07/
chrM3641/5537.64/
chrM44284433/5341.81/
chrM1028910294/5135.1/
chrM14641469/4982.79/
rDNA1443814443/4514.97/
chrM627632/4449.69/
Download the Full Peak List


Visualization

Manual





Copyright © 2023 All Rights Reserved by Wu lab