DNA Damage Atlas

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 Total Page: 14 Total entries: 263


Dataset IDTechnique TypePublicationLast AuthorYearJournalSamples
E-MTAB-1241ChIP-seqTranscriptionally active chromatin recruits homologous recombination at DNA double-strand breaksGaëlle Legube2014Nature Structural & Molecular Biology5
E-MTAB-5817BLESS + ChIP-seqComprehensive Mapping of Histone Modifications at DNA Double-Strand Breaks Deciphers Repair Pathway Chromatin SignaturesGaëlle Legube2018Molecular Cell13
GSE100234 ChIP-seq + OxiDIP-SeqGenome-wide mapping of 8-oxo-7,8-dihydro-2'-deoxyguanosine reveals accumulation of oxidatively-generated damage at DNA replication origins within transcribed long genes of mammalian cellsBarbara Majello2019Nucleic Acids Research8
GSE100352HydEn-seqRibonucleotides incorporated by the yeast mitochondrial DNA polymerase are not repairedAndrei Chabes2017PANS49
GSE100817ChIP-seqDivision-induced DNA double strand breaks in the chromosome terminus region of Escherichia coli lacking RecBCD DNA repair enzymeDavid R F Leach2017PLoS Genetics4
GSE101339SPO11-oligoMechanistic View and Genetic Control of DNA Recombination during MeiosisBertrand Llorente2018Molecular Cell1
GSE103487CPD-seqETS transcription factors induce a unique UV damage signature that drives recurrent mutagenesis in melanomaJohn J Wyrick2018Nature Communications10
GSE103612HydEn-seqRNase H1 directs origin-specific initiation of DNA replication in human mitochondriaClaes M Gustafsson2019Plos Genetics4
GSE103624LAM-HTGTSMechanism of tandem duplication formation in BRCA1-mutant cells.Ralph Scully2017Nature25
GSE104800ChIP-seqReplication Stress Shapes a Protective Chromatin Environment across Fragile Genomic RegionsPhilipp Oberdoerffer2018Molecular Cell16
GSE106822HTGTSThree classes of recurrent DNA break clusters in brain progenitors identified by 3D proximity-based break joining assayFrederick W Alt2018PANS118
GSE106823XR-seqRNA polymerase II is released from the DNA template during transcription-coupled repair in mammalian cellsChristopher P Selby2018Journal of Biological Chemistry14
GSE106922HTGTSDNA double-strand break response factors influence end-joining features of IgH class switch and general translocation junctionsFrederick W Alt2018PANS48
GSE107972ChIP-seqRecBCD coordinates repair of two ends at a DNA double-strand break, preventing aberrant chromosome amplificationDavid R F Leach2018Nucleic Acids Research8
GSE108172i-BLESS + ChIP-seqTopoisomerase 1 prevents replication stress at R-loop-enriched transcription termination sitesPhilippe Pasero2020Nature Communications16
GSE108932XR-seqGenome-wide excision repair in Arabidopsis is coupled to transcription and reflects circadian gene expression patternsOgun Adebali2018Nature Communications16
GSE109874ChIP-seqHistone methyltransferase PRDM9 is not essential for meiosis in male miceZdenek Trachtulec2019Genome Research8
GSE109938XR-seqCisplatin-DNA adduct repair of transcribed genes is controlled by two circadian programs in mouse tissuesAziz Sancar2018PANS24
GSE110028ChIP-seqDeregulated Expression of Mammalian lncRNA through Loss of SPT6 Induces R-Loop Formation, Replication Stress, and Cellular SenescenceNick J Proudfoot2018Molecular Cell10
GSE110241HydEn-seqDNA polymerase η contributes to genome-wide lagging strand synthesisAnders R Clausen2019Nucleic Acids Research33


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