DNA Damage Atlas


OER203692-PEM-seq_mESC_WT_Cep290-YJ201e




Basic Information

Manual

Sample ID:   

OER203692


Source Project ID:   

OEP001736

Cell Type:   

mESC


Organism:   

Mus musculus


Treatment:   

transfected with 7.2 μg pX330-Cas9 plus 1.8 μg GFP expression vector


Genotype:   

WT


Harvested Time:   

72 h stimulation


Targeted break:   

Cep290 sgRNA


Layout:   

PAIRED


Instrument model:   

HiSeq X Ten


Technique:   

PEM-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1399273563992737649927356399854.9+
chr731298612312988133129881393981.1-
chr1011901200311901249111901228682257.5-
chr478210377821238782103882233.5+
chr1113839760138399641383976081024.1+
chr524563826245640362456382773087.1+
chr1510240516010240536310240536369791.4-
chr1012815621612815641812815621658447.4+
chr1040622357406225604062256058159.5-
chr1863459085634592896345928857874.4-
Download the Full Peak List




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