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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE184926
PMID:
35217627
Technique Type:
XR-seq
Publication:
CSB-independent, XPC-dependent transcription-coupled repair in Drosophila
First Author:
Nazli Deger
Last Author:
Zhenxing Liu
Year:
2022
Journal:
PANS
Access Link:
Samples ( 73 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM5600445-Drosophila_Adult-2hr-CPD_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600446-Drosophila_Adult-2hr-6-4_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600447-Drosophila_Adult-yw-2hr-CPD_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600448-Drosophila_Adult-male-2hr-CPD_rep1 | Drosophila Adults-male | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600449-Drosophila_Adult-male-2hr-6-4_rep1 | Drosophila Adults-male | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600450-Drosophila_Adult-female-2hr-CPD_rep1 | Drosophila Adults-female | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600451-Drosophila_Adult-female-2hr-6-4_rep1 | Drosophila Adults-female | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600452-Drosophila_Embryo-2hr-CPD_rep1 | Drosophila Embryo | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600453-Drosophila_Embryo-2hr-6-4_rep1 | Drosophila Embryo | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600454-Drosophila_Larva-2hr-CPD_rep1 | Drosophila Larva | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600455-Drosophila_Larva-2hr-6-4_rep1 | Drosophila Larva | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600456-Drosophila_Pupa-2hr-CPD_rep1 | Drosophila Pupa | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600457-Drosophila_Pupa-2hr-6-4_rep1 | Drosophila Pupa | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600458-Drosophila_Adult-15min-CPD_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600459-Drosophila_Adult-15min-6-4_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600460-Drosophila_Adult-30min-CPD_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600461-Drosophila_Adult-30min-6-4_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600462-Drosophila_Adult-1hr-CPD_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600463-Drosophila_Adult-1hr-6-4_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600464-Drosophila_Adult-4hr-CPD_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600465-Drosophila_Adult-4hr-6-4_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600466-Drosophila_Adult-8hr-CPD_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600467-Drosophila_Adult-8hr-6-4_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600468-Drosophila_Adult-16hr-CPD_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600469-Drosophila_Adult-16hr-6-4_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600470-Drosophila_Adult-2days-CPD_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600471-Drosophila_Adult-2days-6-4_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600472-Drosophila_Adult-4days-CPD_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600473-Drosophila_Adult-4days-6-4_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600474-Drosophila_Adult-8days-CPD_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600475-Drosophila_Adult-8days-6-4_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5600476-Drosophila_Adult-xpc_ko-2hr-CPD_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | XPC-/- | / | / | / | XR-seq | |
| GSM5600477-Drosophila_Adult-xpc_ko-2hr-6-4_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | XPC-/- | / | / | / | XR-seq | |
| GSM5600478-Drosophila_s2_cells-1hr-CPD_rep1 | Drosophila s2 cell | Drosophila melanogaster | UVC | WT | / | / | / | XR-seq | |
| GSM5600479-Drosophila_s2_cells-1hr-6-4_rep1 | Drosophila s2 cell | Drosophila melanogaster | UVC | WT | / | / | / | XR-seq | |
| GSM5600480-Drosophila_s2_cells-1_5hr-150um_cisplatin_rep1 | Drosophila s2 cell | Drosophila melanogaster | Cisplatin | WT | / | / | / | XR-seq | |
| GSM5600481-Drosophila_s2_cells-1_5hr-200um_cisplatin_rep1 | Drosophila s2 cell | Drosophila melanogaster | Cisplatin | WT | / | / | / | XR-seq | |
| GSM5661640-Drosophila_Adult-2hr-CPD_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661641-Drosophila_Adult-2hr-6-4_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661642-Drosophila_Adult-yw-male-2hr-CPD_rep2 | Drosophila Adults-male | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661643-Drosophila_Adult-yw-fenale-2hr-CPD_rep2 | Drosophila Adults-female | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661644-Drosophila_Embryo-2hr-CPD_rep2 | Drosophila Embryo | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661645-Drosophila_Embryo-2hr-6-4_rep2 | Drosophila Embryo | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661646-Drosophila_Larva-2hr-CPD_rep2 | Drosophila Larva | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661647-Drosophila_Larva-2hr-6-4_rep2 | Drosophila Larva | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661648-Drosophila_Pupa-2hr-CPD_rep2 | Drosophila Pupa | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661649-Drosophila_Pupa-2hr-6-4_rep2 | Drosophila Pupa | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661650-Drosophila_Adult-15min-CPD_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661651-Drosophila_Adult-15min-6-4_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661652-Drosophila_Adult-30min-CPD_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661653-Drosophila_Adult-30min-6-4_rep1 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661654-Drosophila_Adult-1hr-CPD_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661655-Drosophila_Adult-1hr-6-4_rep3 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661656-Drosophila_Adult-4hr-CPD_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661657-Drosophila_Adult-4hr-6-4_rep3 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661658-Drosophila_Adult-8hr-CPD_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661659-Drosophila_Adult-8hr-6-4_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661660-Drosophila_Adult-16hr-CPD_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661661-Drosophila_Adult-16hr-6-4_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661662-Drosophila_Adult-2days-CPD_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661663-Drosophila_Adult-2days-6-4_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661664-Drosophila_Adult-4days-CPD_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661665-Drosophila_Adult-4days-6-4_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661666-Drosophila_Adult-8days-CPD_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661667-Drosophila_Adult-8days-6-4_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661668-Drosophila_Adult-xpc_ko-2hr-CPD_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | XPC-/- | / | / | / | XR-seq | |
| GSM5661669-Drosophila_Adult-xpc_ko-2hr-6-4_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | XPC-/- | / | / | / | XR-seq | |
| GSM5661670-Drosophila_s2_cells-1hr-CPD_rep2 | Drosophila s2 cell | Drosophila melanogaster | UVC | WT | / | / | / | XR-seq | |
| GSM5661671-Drosophila_s2_cells-1hr-6-4_rep2 | Drosophila s2 cell | Drosophila melanogaster | UVC | WT | / | / | / | XR-seq | |
| GSM5661672-Drosophila_s2_cells-1_5hr-150um_cisplatin_rep2 | Drosophila s2 cell | Drosophila melanogaster | Cisplatin | WT | / | / | / | XR-seq | |
| GSM5661673-Drosophila_s2_cells-1_5hr-200um_cisplatin_rep2 | Drosophila s2 cell | Drosophila melanogaster | Cisplatin | WT | / | / | / | XR-seq | |
| GSM5661674-Drosophila_Adult-yw-2hr-6-4_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq | |
| GSM5661675-Drosophila_Adult-yw-2hr-CPD_rep2 | Drosophila Adults | Drosophila melanogaster | UVB | / | / | / | / | XR-seq |
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